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Berlin

    PhD position in Computational and Developmental Biology in Berlin - MDC

    MDC
    MDC Berlin, Deutschland

    vor 6 Tagen

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    Beschreibung

    Job Description

  • You will develop new algorithms to infer cellular differentiation trajectories in the developing embryo from time-resolved single-cell RNA, spatial transcriptomics and lineage tracing data
  • You will use machine learning methods to combine spatial transcriptomics data with other data modalities such as single-cell transcriptome or advanced microscopy data
  • You will compare mouse embryonic development with a variety of other species (e.g. human, fish, bird) and synthetic embryo models
  • You will analyse and compare synthetic organoid development with in vivo embryonic development
  • You will work closely with experimental collaborators
  • You will be an active member in a highly interdisciplinary team, that involves data scientists and computational and experimental biologists

    • Requirements

  • MSc degree in the computational or natural sciences
  • Strong computational or quantitative focus (computational biology, bioinformatics, mathematics or a related field)
  • Strong programming skills (Python, R) are essential; experience in building efficient and reusable software would be a plus
  • Excellent communication skills facilitating frequent exchange with group members and scientific collaborators
  • Solid statistical knowledge and experience with state-of-the-art machine learning methods
  • Ability to work independently and to undertake challenging analysis tasks

    • We offer

  • international working environment with communication in English and German
  • interesting career opportunities and a range of opportunities for further qualification and training
  • Compatibility of family and career certified by the workandfamily audit ("berufundfamilie audit")
  • Support for "New Berliners" through the MDC Welcome & Family Office
  • On-campus health and fitness center
  • Stimulating and international research environment with excellent science
  • Opportunity to work on cutting-edge biomedical data
  • Ability to become an expert in single-cell genomics and machine learning approaches to biomedical data

    • You also benefit from:

  • A remuneration in accordance with the collective agreement for the federal public service (TVöD-Bund), including additional company pension schemes
  • Flexible working hours and childcare support
  • Subsidy for the job ticket
  • Additional health benefits such as flu vaccination, eye test, ergonomics advice at the workplace
  • The possibility of mobile working
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